Gene detail information of Glyur000953s00031165.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26100.10casein kinase 1
NRXP_007154635.10hypothetical protein PHAVU_003G135100g [Phaseolus vulgaris]
COGYP_632759.14.00E-19serine/threonine-protein kinase PKN1 [Myxococcus xanthus DK 1622]
Swissprottr|P42158|KC1D_ARATH0Casein kinase I isoform delta-like
trEMBLtr|V7C917|V7C917_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW26629.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00953904928088-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02218CSNK1, CKI EC:2.7.11.1 MAPK signaling pathway - yeast map04011
Hippo signaling pathway - multiple speciesmap04392


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000953s00031165.1PF00069.20Pkinase92655.80E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control44.893
SRR1783600control45.308
SRR1783602moderate drought stress35.198
SRR1811619moderate drought stress35.267

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.438
DRR006520Root Summer glycyrrhizin high producing strain32.653
DRR006521Root Winter glycyrrhizin high producing strain33.694
DRR006522Root Winter glycyrrhizin high producing strain33.497
DRR006523Root Summer glycyrrhizin low producing strain28.002
DRR006524Root Summer glycyrrhizin low producing strain28.090
DRR006525Leaf Summer glycyrrhizin high producing strain20.491
DRR006526Leaf Summer glycyrrhizin high producing strain20.319

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.688
SRR2868004Drought Stress(Tissue:root)32.407
SRR2967015Control (Tissue:root)30.175

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave41.079
SRR9715740Leave43.990
SRR9715741Leave44.442
SRR9715739Root12.230
SRR9715742Root26.350
SRR9715743Root23.062

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h49.124
SRR8749028MeJA induced 9h44.747
SRR8749029MeJA induced 9h47.114
SRR8749030Uninduced42.276
SRR8749031Uninduced71.712
SRR8749032Uninduced61.302

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.942
SRR8400027Control-Root47.748

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved