Gene detail information of Glyur000953s00031175.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G64280.1 | 1.00E-132 | regulatory protein (NPR1) |
| NR | XP_003534926.1 | 0 | PREDICTED: LOW QUALITY PROTEIN: regulatory protein NPR1-like [Glycine max] |
| Swissprot | tr|P93002|NPR1_ARATH | 2.00E-176 | Regulatory protein NPR1 |
| trEMBL | tr|G7IQ63|G7IQ63_MEDTR | 0 | Regulatory protein NPR1 {ECO:0000313|EMBL:AES65476.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00953 | 81929 | 87738 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | TRAF |
| Ubiquitin Family | BTB |
| EAR motif-containing Proteins | TRAF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000953s00031175.1 | PF00651.26 | BTB | 66 | 143 | 1.50E-08 |
| Glyur000953s00031175.1 | PF12796.2 | Ank_2 | 281 | 366 | 3.50E-13 |
| Glyur000953s00031175.1 | PF12313.3 | NPR1_like_C | 381 | 501 | 2.90E-47 |
| Glyur000953s00031175.1 | PF12313.3 | NPR1_like_C | 502 | 559 | 1.10E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.063 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.062 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.109 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.075 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.028 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.042 |
| SRR8400027 | Control-Root | 0.032 |