Gene detail information of Glyur000954s00026531.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G03520.11.00E-170Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
NRXP_007132639.10hypothetical protein PHAVU_011G112200g [Phaseolus vulgaris]
COGYP_007090122.11.00E-05Core-2/I-Branching enzyme [Chroococcidiopsis thermalis PCC 7203]
trEMBLtr|V7AIF6|V7AIF6_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW04633.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009541804723124+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT14


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0016020  membrane


molecular_function

GO:0008375  acetylglucosaminyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000954s00026531.1PF02485.16Branch903521.40E-65


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.805
SRR1783600control11.922
SRR1783602moderate drought stress10.373
SRR1811619moderate drought stress10.386

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.664
DRR006520Root Summer glycyrrhizin high producing strain11.977
DRR006521Root Winter glycyrrhizin high producing strain11.556
DRR006522Root Winter glycyrrhizin high producing strain11.110
DRR006523Root Summer glycyrrhizin low producing strain17.562
DRR006524Root Summer glycyrrhizin low producing strain17.713
DRR006525Leaf Summer glycyrrhizin high producing strain8.056
DRR006526Leaf Summer glycyrrhizin high producing strain8.173

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)17.558
SRR2868004Drought Stress(Tissue:root)18.807
SRR2967015Control (Tissue:root)18.298

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.136
SRR9715740Leave16.721
SRR9715741Leave13.830
SRR9715739Root10.513
SRR9715742Root14.627
SRR9715743Root13.276

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h23.977
SRR8749028MeJA induced 9h33.880
SRR8749029MeJA induced 9h21.119
SRR8749030Uninduced28.205
SRR8749031Uninduced20.092
SRR8749032Uninduced13.466

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root22.545
SRR8400027Control-Root25.042

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved