Gene detail information of Glyur000954s00026538.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67730.11.00E-90beta-ketoacyl reductase 1
NRXP_004502349.13.95E-162PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1-like [Cicer arietinum]
COGYP_001352800.12.00E-21short-chain dehydrogenase [Janthinobacterium sp. Marseille]
Swissprottr|Q8L9C4|KCR1_ARATH1.00E-118Very-long-chain 3-oxoacyl-CoA reductase 1
trEMBLtr|G7J2K6|G7J2K6_MEDTR1.00E-161Enoyl-(Acyl carrier) reductase {ECO:0000313|EMBL:AES72113.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009545438857558-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10251HSD17B12, KAR, IFA38 EC:1.1.1.62 1.1.1.330 Fatty acid metabolism map01212
Fatty acid elongationmap00062
Steroid hormone biosynthesismap00140
Biosynthesis of unsaturated fatty acidsmap01040


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000954s00026538.1PF00106.20adh_short552001.70E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control46.359
SRR1783600control45.885
SRR1783602moderate drought stress35.668
SRR1811619moderate drought stress35.171

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.552
DRR006520Root Summer glycyrrhizin high producing strain29.146
DRR006521Root Winter glycyrrhizin high producing strain76.145
DRR006522Root Winter glycyrrhizin high producing strain70.600
DRR006523Root Summer glycyrrhizin low producing strain24.882
DRR006524Root Summer glycyrrhizin low producing strain25.961
DRR006525Leaf Summer glycyrrhizin high producing strain28.796
DRR006526Leaf Summer glycyrrhizin high producing strain27.371

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)138.698
SRR2868004Drought Stress(Tissue:root)77.415
SRR2967015Control (Tissue:root)79.724

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave30.049
SRR9715740Leave24.986
SRR9715741Leave29.109
SRR9715739Root150.620
SRR9715742Root57.784
SRR9715743Root73.155

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.848
SRR8749028MeJA induced 9h38.315
SRR8749029MeJA induced 9h16.128
SRR8749030Uninduced62.147
SRR8749031Uninduced45.009
SRR8749032Uninduced80.941

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root163.218
SRR8400027Control-Root162.727

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved