Gene detail information of Glyur000954s00026539.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G67730.11.00E-10beta-ketoacyl reductase 1
NRAFK47548.14.83E-39unknown [Lotus japonicus]
Swissprottr|Q8L9C4|KCR1_ARATH2.00E-12Very-long-chain 3-oxoacyl-CoA reductase 1
trEMBLtr|I3T4V6|I3T4V6_LOTJA2.00E-39Uncharacterized protein {ECO:0000313|EMBL:AFK47548.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009546391764186-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10251HSD17B12, KAR, IFA38 EC:1.1.1.62 1.1.1.330 Fatty acid metabolism map01212
Fatty acid elongationmap00062
Steroid hormone biosynthesismap00140
Biosynthesis of unsaturated fatty acidsmap01040


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
----------


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.223
SRR1783600control7.453
SRR1783602moderate drought stress10.359
SRR1811619moderate drought stress10.164

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.594
DRR006520Root Summer glycyrrhizin high producing strain2.168
DRR006521Root Winter glycyrrhizin high producing strain3.912
DRR006522Root Winter glycyrrhizin high producing strain3.796
DRR006523Root Summer glycyrrhizin low producing strain0.409
DRR006524Root Summer glycyrrhizin low producing strain0.410
DRR006525Leaf Summer glycyrrhizin high producing strain2.560
DRR006526Leaf Summer glycyrrhizin high producing strain2.507

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.792
SRR2868004Drought Stress(Tissue:root)10.256
SRR2967015Control (Tissue:root)10.739

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.421
SRR9715740Leave3.010
SRR9715741Leave4.995
SRR9715739Root23.150
SRR9715742Root27.406
SRR9715743Root30.656

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.130
SRR8749028MeJA induced 9h3.150
SRR8749029MeJA induced 9h3.588
SRR8749030Uninduced22.760
SRR8749031Uninduced21.431
SRR8749032Uninduced42.693

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.748
SRR8400027Control-Root34.741