Gene detail

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Gene detail information of Glyur000957s00027269.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G49690.1	9.00E-101	UDP-Glycosyltransferase superfamily protein
NR	AGU14093.1	0	UDP-glycosyltransferase [Cicer arietinum]
Swissprot	tr\|Q66PF2\|URT1_FRAAN	7.00E-127	Putative UDP-rhamnose:rhamnosyltransferase 1
trEMBL	tr\|A0A067XT88\|A0A067XT88_CICAR	0	UDP-glycosyltransferase {ECO:0000313\|EMBL:AGU14093.1}

Sequence

Transcript Sequence

>Glyur000957s00027269.1
ATGGCTGAGGAAGCAATTCATGTAGTGATGCTTCCATGGTCTGCCTTTGGCCACTTGATACCATTTTTCAAACTTTCCATAGCCTTAGCCAAAGCTGGTGTTCATGTCTCCTACATATCAACTCCCAAAAACATTCAAAGGCTTCCTGAACTTCCTTCAACTTTAGCTCACTTAATAGATTTGGTGGGAATTCCATTACCATCATTGGACACAGATCTCTTGCCAGAAGGTGCTGAGGCCACTATGGACATTCCATTTGAAAAGATTGAATACTTGAAACTTGCATATGATCAACTCCAACATCCAGTGAAGCAATTAGTGACCAAATGGTCACCTGATTGGATAATTTGTGATTTTAGTCCCCACTGGATGGCAGAGATTGCCCAAGAGTTTCAGGCAAAGCTAATCTTCTATTCTGTGATATCGGCCGCAACACTAGTGTTACTTGGACCACCAGGTACAATGAAAACTCGGTTCTCCCCAGAGAGTCTAACAGTACCACCGGAATGGGTGACATTTCCATCATCAGTGGCTTATCACANAAATGAGGCAGCTGCTTTCTGTGCTGGTGCCTTGCAGGACAATGCTTCCGGGATTGGTGATGTTGAAAGGCTTGTCAAGATAATCGGTGCCTCTAAAGCCGTGATATGCCGTGGTTGCTATGAGATTGATGGTGAATATCTGAATCTATACAAGAAACTAGTTGAGAAGCCTATGATTCCCATAGGTTTGTTGCCAGTAGAGAGGCCACAGAGAGGAACTGTGGATGGATCATGGAGTGAGATATTTAAGTGGCTTGATAAGCAAGCATCCAAATCAGCTGTGTTTGTGGGGTTTGGCAGTGAATGCAAGCTGAGCAAGGACCAAGTTTTTGAAATAGCTTTTGGACTTGAGGTGTCTGAATTGCCATTTCTATGGGCACTAAGGAAACCTGGTTGGGCAAGTAGTGATCATGATTCTCTACCTTTTGGTTTTACTGAAAGAACATCTGAGAGAGGAATTGTTTGTATGGGATGGATACCACAACAGGAGATATTGGCGCATCCATCTATTGGGGCGTCTTTGTTTCACTCTGGTTGGGGTTCTGCCATTGAAACCCTGCANTTTGGTCACAAACTTGTTGTACTACCCTTCATTATTGATCAGCCTCTTAATGCAAGGTTTTTGGTGGATAAGGGTTTGGCCATAGAAGTGAAAAGAAATGAAGATGGGTCATTCACTAGAAATGAAATTGCCAAGTCTCTTAGACAAGCAATGGTGTTGGAGGAAGGAGAGAAGCTCAGGATTAAAGCAAGAGAAGCTGCTGCAATTGTAGGAAACTTGAAGCTGCATCAGGATCATTACATAGCAGCATTTGTCCAATTTCTCAAGAATGGAATCTGGAAACAGATATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00957	52433	53827	-

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GT1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function GO:0016758 transferase activity, transferring hexosyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000957s00027269.1	PF00201.13	UDPGT	267	416	5.40E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.157
SRR1783600	control	0.132
SRR1783602	moderate drought stress	0.136
SRR1811619	moderate drought stress	0.109

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.080
DRR006522	Root Winter glycyrrhizin high producing strain	0.078
DRR006523	Root Summer glycyrrhizin low producing strain	0.079
DRR006524	Root Summer glycyrrhizin low producing strain	0.079
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.020
SRR2868004	Drought Stress(Tissue:root)	0.000
SRR2967015	Control (Tissue:root)	0.037

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	0.537
SRR9715740	Leave	0.000
SRR9715741	Leave	0.230
SRR9715739	Root	0.000
SRR9715742	Root	0.551
SRR9715743	Root	0.491

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.076
SRR8749028	MeJA induced 9h	0.076
SRR8749029	MeJA induced 9h	0.050
SRR8749030	Uninduced	0.046
SRR8749031	Uninduced	0.196
SRR8749032	Uninduced	0.066

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.085
SRR8400027	Control-Root	0.120