Gene detail information of Glyur000957s00027273.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G01330.11.00E-89Protein kinase superfamily protein
NRXP_003622458.14.51E-152hypothetical protein MTR_7g037990 [Medicago truncatula]
COGYP_003165781.11.00E-11cyclic nucleotide-binding protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1]
Swissprottr|Q3EDL4|Y1154_ARATH2.00E-117Probable serine/threonine-protein kinase At1g01540
trEMBLtr|A0A072TNP0|A0A072TNP0_MEDTR2.00E-152Serine/Threonine-kinase plant-like protein, putative {ECO:0000313|EMBL:KEH18811.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009578483386379+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000957s00027273.1PF00069.20Pkinase71353.50E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.533
SRR1783600control1.715
SRR1783602moderate drought stress2.414
SRR1811619moderate drought stress2.549

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.467
DRR006520Root Summer glycyrrhizin high producing strain1.756
DRR006521Root Winter glycyrrhizin high producing strain1.110
DRR006522Root Winter glycyrrhizin high producing strain0.833
DRR006523Root Summer glycyrrhizin low producing strain3.383
DRR006524Root Summer glycyrrhizin low producing strain4.168
DRR006525Leaf Summer glycyrrhizin high producing strain0.567
DRR006526Leaf Summer glycyrrhizin high producing strain0.626

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.982
SRR2868004Drought Stress(Tissue:root)3.453
SRR2967015Control (Tissue:root)3.614

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.803
SRR9715740Leave0.712
SRR9715741Leave1.216
SRR9715739Root0.318
SRR9715742Root2.131
SRR9715743Root3.146

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.313
SRR8749028MeJA induced 9h1.114
SRR8749029MeJA induced 9h0.112
SRR8749030Uninduced0.300
SRR8749031Uninduced0.133
SRR8749032Uninduced0.320

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.707
SRR8400027Control-Root2.583

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved