Gene detail information of Glyur000958s00027844.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G17850.10Protein kinase superfamily protein
NRXP_004512760.10PREDICTED: uncharacterized protein LOC101496611 isoform X1 [Cicer arietinum]
COGYP_004582129.14.00E-21serine/threonine protein kinase [Frankia symbiont of Datisca glomerata]
Swissprottr|F4J6F6|IREH1_ARATH0Probable serine/threonine protein kinase IREH1 {ECO:0000305}
trEMBLtr|K7LEH0|K7LEH0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G30441.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009583683149027+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000958s00027844.1PF00069.20Pkinase85911431.20E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.976
SRR1783600control11.093
SRR1783602moderate drought stress11.361
SRR1811619moderate drought stress11.293

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.097
DRR006520Root Summer glycyrrhizin high producing strain13.590
DRR006521Root Winter glycyrrhizin high producing strain13.914
DRR006522Root Winter glycyrrhizin high producing strain13.276
DRR006523Root Summer glycyrrhizin low producing strain15.288
DRR006524Root Summer glycyrrhizin low producing strain15.311
DRR006525Leaf Summer glycyrrhizin high producing strain9.701
DRR006526Leaf Summer glycyrrhizin high producing strain9.790

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.798
SRR2868004Drought Stress(Tissue:root)31.814
SRR2967015Control (Tissue:root)32.240

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.393
SRR9715740Leave16.161
SRR9715741Leave20.430
SRR9715739Root7.899
SRR9715742Root21.194
SRR9715743Root17.248

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.903
SRR8749028MeJA induced 9h19.057
SRR8749029MeJA induced 9h19.927
SRR8749030Uninduced23.303
SRR8749031Uninduced28.545
SRR8749032Uninduced25.560

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.372
SRR8400027Control-Root25.571

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved