Gene detail information of Glyur000958s00027845.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G17840.13.00E-125receptor-like kinase 902
NRKEH26683.10LRR receptor-like kinase family protein [Medicago truncatula]
COGYP_004579826.12.00E-19hypothetical protein [Lacinutrix sp. 5H-3-7-4]
Swissprottr|Q9LP77|Y1848_ARATH0Probable inactive receptor kinase At1g48480 (Precursor)
trEMBLtr|A0A072UCA8|A0A072UCA8_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH26683.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009585264555963-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000958s00027845.1PF08263.7LRRNT_221561.00E-07
Glyur000958s00027845.1PF13855.1LRR_81091687.90E-09
Glyur000958s00027845.1PF00069.20Pkinase3636253.20E-37


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.062
SRR1783600control23.316
SRR1783602moderate drought stress14.753
SRR1811619moderate drought stress14.615

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.001
DRR006520Root Summer glycyrrhizin high producing strain15.909
DRR006521Root Winter glycyrrhizin high producing strain0.087
DRR006522Root Winter glycyrrhizin high producing strain0.085
DRR006523Root Summer glycyrrhizin low producing strain4.971
DRR006524Root Summer glycyrrhizin low producing strain4.982
DRR006525Leaf Summer glycyrrhizin high producing strain10.660
DRR006526Leaf Summer glycyrrhizin high producing strain10.678

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)52.650
SRR2868004Drought Stress(Tissue:root)33.928
SRR2967015Control (Tissue:root)34.378

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.763
SRR9715740Leave4.810
SRR9715741Leave3.394
SRR9715739Root16.257
SRR9715742Root8.797
SRR9715743Root8.962

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.032
SRR8749028MeJA induced 9h1.549
SRR8749029MeJA induced 9h1.087
SRR8749030Uninduced0.636
SRR8749031Uninduced0.060
SRR8749032Uninduced0.134

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root52.166
SRR8400027Control-Root48.070

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved