Gene detail information of Glyur000960s00023955.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G07900.1 | 5.00E-24 | Mitochondrial transcription termination factor family protein |
| NR | XP_004516317.1 | 1.15E-86 | PREDICTED: uncharacterized protein LOC101488741 [Cicer arietinum] |
| trEMBL | tr|V7BMI8|V7BMI8_PHAVU | 1.00E-82 | Uncharacterized protein {ECO:0000313|EMBL:ESW18248.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00960 | 52536 | 53809 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000960s00023955.1 | PF02536.9 | mTERF | 82 | 201 | 4.60E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.160 |
| SRR1783600 | control | 10.303 |
| SRR1783602 | moderate drought stress | 9.210 |
| SRR1811619 | moderate drought stress | 8.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.618 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.366 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.653 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.272 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.931 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.519 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.720 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.662 |
| SRR2868004 | Drought Stress(Tissue:root) | 7.070 |
| SRR2967015 | Control (Tissue:root) | 7.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.739 |
| SRR9715740 | Leave | 3.843 |
| SRR9715741 | Leave | 5.422 |
| SRR9715739 | Root | 5.886 |
| SRR9715742 | Root | 7.918 |
| SRR9715743 | Root | 6.957 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.211 |
| SRR8749028 | MeJA induced 9h | 7.208 |
| SRR8749029 | MeJA induced 9h | 3.482 |
| SRR8749030 | Uninduced | 4.071 |
| SRR8749031 | Uninduced | 0.881 |
| SRR8749032 | Uninduced | 1.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.577 |
| SRR8400027 | Control-Root | 12.364 |