Gene detail information of Glyur000961s00028332.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G59900.17.00E-180pyruvate dehydrogenase complex E1 alpha subunit
NRXP_007044461.10Pyruvate dehydrogenase complex E1 alpha subunit, ALPHA,E1 ALPHA isoform 1 [Theobroma cacao]
COGYP_007698747.11.00E-96pyruvate dehydrogenase E1 component subunit alpha [Octadecabacter arcticus 238]
Swissprottr|P52902|ODPA_PEA0Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial (Precursor)
trEMBLtr|A0A061E6P1|A0A061E6P1_THECC0Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000256|RuleBase:RU361139}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009615242960078+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00161PDHA, pdhA EC:1.2.4.1 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620
HIF-1 signaling pathwaymap04066
Glucagon signaling pathwaymap04922
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016624  oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000961s00028332.1PF00676.15E1_dh2063411.40E-50


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control134.427
SRR1783600control132.990
SRR1783602moderate drought stress104.463
SRR1811619moderate drought stress100.918

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain122.932
DRR006520Root Summer glycyrrhizin high producing strain121.153
DRR006521Root Winter glycyrrhizin high producing strain110.142
DRR006522Root Winter glycyrrhizin high producing strain106.673
DRR006523Root Summer glycyrrhizin low producing strain94.689
DRR006524Root Summer glycyrrhizin low producing strain95.788
DRR006525Leaf Summer glycyrrhizin high producing strain96.885
DRR006526Leaf Summer glycyrrhizin high producing strain96.746

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)258.451
SRR2868004Drought Stress(Tissue:root)188.623
SRR2967015Control (Tissue:root)178.186

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave126.032
SRR9715740Leave91.795
SRR9715741Leave135.196
SRR9715739Root92.477
SRR9715742Root155.908
SRR9715743Root142.147

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h147.975
SRR8749028MeJA induced 9h122.280
SRR8749029MeJA induced 9h132.558
SRR8749030Uninduced106.806
SRR8749031Uninduced161.007
SRR8749032Uninduced91.340

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root152.013
SRR8400027Control-Root149.677

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved