Gene detail information of Glyur000962s00030557.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12580.12.00E-153phosphoenolpyruvate carboxylase-related kinase 1
NRAGI78245.10phosphoenolpyruvate carboxylase-related kinase 1 [Caragana korshinskii]
COGYP_007120134.13.00E-28protein kinase family protein [Microcoleus sp. PCC 7113]
Swissprottr|A5A7I7|CDPK4_SOLTU4.00E-94Calcium-dependent protein kinase 4
trEMBLtr|M9RTK3|M9RTK3_9FABA0Phosphoenolpyruvate carboxylase-related kinase 1 {ECO:0000313|EMBL:AGI78245.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009622510328897+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000962s00030557.1PF00069.20Pkinase433002.20E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.698
SRR1783600control16.369
SRR1783602moderate drought stress27.522
SRR1811619moderate drought stress27.444

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.492
DRR006520Root Summer glycyrrhizin high producing strain23.120
DRR006521Root Winter glycyrrhizin high producing strain17.676
DRR006522Root Winter glycyrrhizin high producing strain16.662
DRR006523Root Summer glycyrrhizin low producing strain35.351
DRR006524Root Summer glycyrrhizin low producing strain35.425
DRR006525Leaf Summer glycyrrhizin high producing strain5.559
DRR006526Leaf Summer glycyrrhizin high producing strain5.499

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.243
SRR2868004Drought Stress(Tissue:root)38.845
SRR2967015Control (Tissue:root)42.367

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.805
SRR9715740Leave14.953
SRR9715741Leave14.104
SRR9715739Root28.020
SRR9715742Root32.188
SRR9715743Root28.427

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h14.499
SRR8749028MeJA induced 9h15.833
SRR8749029MeJA induced 9h8.361
SRR8749030Uninduced6.344
SRR8749031Uninduced4.149
SRR8749032Uninduced3.687

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.810
SRR8400027Control-Root32.922

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved