Gene detail information of Glyur000962s00030566.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G51990.12.00E-38C-repeat-binding factor 4
NRAAV66464.17.27E-93drought responsive element binding protein [Glycine soja]
Swissprottr|Q9FJ93|DRE1D_ARATH2.00E-58Dehydration-responsive element-binding protein 1D
trEMBLtr|Q5RM57|Q5RM57_GLYSO3.00E-93Drought responsive element binding protein {ECO:0000313|EMBL:AAV66464.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009626555977735-


Gene family

Gene familysubfamily
Transcription Factors FamilyERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000962s00030566.1PF00847.15AP2641141.10E-13


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.459
SRR1783600control12.279
SRR1783602moderate drought stress18.216
SRR1811619moderate drought stress17.388

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.620
DRR006520Root Summer glycyrrhizin high producing strain11.507
DRR006521Root Winter glycyrrhizin high producing strain43.843
DRR006522Root Winter glycyrrhizin high producing strain42.034
DRR006523Root Summer glycyrrhizin low producing strain17.043
DRR006524Root Summer glycyrrhizin low producing strain16.788
DRR006525Leaf Summer glycyrrhizin high producing strain4.518
DRR006526Leaf Summer glycyrrhizin high producing strain4.499

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.082
SRR2868004Drought Stress(Tissue:root)10.753
SRR2967015Control (Tissue:root)12.872

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.032
SRR9715740Leave9.499
SRR9715741Leave8.630
SRR9715739Root17.152
SRR9715742Root16.277
SRR9715743Root15.790

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.446
SRR8749028MeJA induced 9h4.393
SRR8749029MeJA induced 9h5.371
SRR8749030Uninduced1.552
SRR8749031Uninduced1.996
SRR8749032Uninduced3.727

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root10.495
SRR8400027Control-Root11.295

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved