Gene detail information of Glyur000963s00023047.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G35090.10catalase 2
NRAAR84578.10catalase 1a [Lotus japonicus]
COGYP_007420475.13.00E-159Catalase [Bacillus thuringiensis serovar kurstaki str. HD73]
Swissprottr|O48561|CATA4_SOYBN0Catalase-4
trEMBLtr|A0PG71|A0PG71_LOTJA0Catalase {ECO:0000256|RuleBase:RU000498}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0096395409100467+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03781katE, CAT, catB, srpA EC:1.11.1.6 Carbon metabolism map01200
Glyoxylate and dicarboxylate metabolismmap00630
Tryptophan metabolismmap00380
MAPK signaling pathway - plantmap04016
MAPK signaling pathway - yeastmap04011
FoxO signaling pathwaymap04068
Peroxisomemap04146
Longevity regulating pathway - mammalmap04211
Longevity regulating pathway - wormmap04212
Longevity regulating pathway - multiple speciesmap04213
Amyotrophic lateral sclerosis (ALS)map05014


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004096  catalase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000963s00023047.1PF00199.14Catalase193831.60E-172
Glyur000963s00023047.1PF06628.7Catalase-rel4154821.20E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control163.572
SRR1783600control164.474
SRR1783602moderate drought stress232.720
SRR1811619moderate drought stress230.590

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain153.547
DRR006520Root Summer glycyrrhizin high producing strain151.600
DRR006521Root Winter glycyrrhizin high producing strain234.285
DRR006522Root Winter glycyrrhizin high producing strain228.981
DRR006523Root Summer glycyrrhizin low producing strain268.929
DRR006524Root Summer glycyrrhizin low producing strain269.026
DRR006525Leaf Summer glycyrrhizin high producing strain1102.371
DRR006526Leaf Summer glycyrrhizin high producing strain1096.000

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)161.832
SRR2868004Drought Stress(Tissue:root)191.662
SRR2967015Control (Tissue:root)175.851

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1135.358
SRR9715740Leave1719.679
SRR9715741Leave1234.057
SRR9715739Root147.535
SRR9715742Root133.436
SRR9715743Root136.368

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h121.100
SRR8749028MeJA induced 9h198.339
SRR8749029MeJA induced 9h143.370
SRR8749030Uninduced163.369
SRR8749031Uninduced236.625
SRR8749032Uninduced230.473

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root150.705
SRR8400027Control-Root133.015

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved