Gene detail information of Glyur000966s00025841.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G59010.10Protein kinase protein with tetratricopeptide repeat domain
NRXP_007132022.10hypothetical protein PHAVU_011G060100g [Phaseolus vulgaris]
COGYP_007203672.12.00E-11serine/threonine protein kinase [Singulisphaera acidiphila DSM 18658]
Swissprottr|Q9FHD7|Y5126_ARATH0Probable serine/threonine-protein kinase At5g41260
trEMBLtr|V7AIT2|V7AIT2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW04016.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009661954525494+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.16.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14500BSK EC:2.7.11.1 Plant hormone signal transduction map04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000966s00025841.1PF07714.12Pkinase_Tyr1764147.70E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.367
SRR1783600control23.826
SRR1783602moderate drought stress16.787
SRR1811619moderate drought stress17.648

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.606
DRR006520Root Summer glycyrrhizin high producing strain21.503
DRR006521Root Winter glycyrrhizin high producing strain5.379
DRR006522Root Winter glycyrrhizin high producing strain4.825
DRR006523Root Summer glycyrrhizin low producing strain17.308
DRR006524Root Summer glycyrrhizin low producing strain17.217
DRR006525Leaf Summer glycyrrhizin high producing strain10.230
DRR006526Leaf Summer glycyrrhizin high producing strain10.280

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)18.290
SRR2868004Drought Stress(Tissue:root)14.618
SRR2967015Control (Tissue:root)14.545

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.472
SRR9715740Leave16.044
SRR9715741Leave9.817
SRR9715739Root10.312
SRR9715742Root11.500
SRR9715743Root12.101

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.231
SRR8749028MeJA induced 9h6.247
SRR8749029MeJA induced 9h5.280
SRR8749030Uninduced4.085
SRR8749031Uninduced1.355
SRR8749032Uninduced2.034

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.471
SRR8400027Control-Root21.180

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved