Gene detail information of Glyur000966s00025849.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36250.13.00E-120aldehyde dehydrogenase 3F1
NRXP_004507095.10PREDICTED: aldehyde dehydrogenase family 3 member F1-like [Cicer arietinum]
COGYP_007068020.14.00E-110aldehyde dehydrogenase [Calothrix sp. PCC 7507]
Swissprottr|Q70E96|AL3F1_ARATH1.00E-150Aldehyde dehydrogenase family 3 member F1
trEMBLtr|I1LJV8|I1LJV8_SOYBN0Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009667569678341+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00128ALDH EC:1.2.1.3 Glycolysis / Gluconeogenesis map00010
Ascorbate and aldarate metabolismmap00053
Pyruvate metabolismmap00620
Fatty acid degradationmap00071
Glycerolipid metabolismmap00561
Valine, leucine and isoleucine degradationmap00280
Lysine degradationmap00310
Arginine and proline metabolismmap00330
Histidine metabolismmap00340
Tryptophan metabolismmap00380
beta-Alanine metabolismmap00410
Insect hormone biosynthesismap00981
Limonene and pinene degradationmap00903
Chloroalkane and chloroalkene degradationmap00625


Gene Ontology

biological_process

GO:0008152  metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016620  oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000966s00025849.1PF00171.17Aldedh71244.50E-18
Glyur000966s00025849.1PF00171.17Aldedh1303442.10E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.020
SRR1783600control3.040
SRR1783602moderate drought stress19.930
SRR1811619moderate drought stress20.145

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.054
DRR006520Root Summer glycyrrhizin high producing strain24.925
DRR006521Root Winter glycyrrhizin high producing strain7.515
DRR006522Root Winter glycyrrhizin high producing strain7.921
DRR006523Root Summer glycyrrhizin low producing strain0.081
DRR006524Root Summer glycyrrhizin low producing strain0.084
DRR006525Leaf Summer glycyrrhizin high producing strain3.698
DRR006526Leaf Summer glycyrrhizin high producing strain3.451

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.325
SRR2868004Drought Stress(Tissue:root)2.984
SRR2967015Control (Tissue:root)2.574

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.802
SRR9715740Leave26.924
SRR9715741Leave9.683
SRR9715739Root11.924
SRR9715742Root10.951
SRR9715743Root10.716

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.819
SRR8749028MeJA induced 9h12.145
SRR8749029MeJA induced 9h10.930
SRR8749030Uninduced3.837
SRR8749031Uninduced5.337
SRR8749032Uninduced3.822

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root39.568
SRR8400027Control-Root48.062

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved