Gene detail information of Glyur000966s00025855.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63440.1 | 7.00E-44 | heavy metal atpase 5 |
| NR | EYU46272.1 | 6.53E-63 | hypothetical protein MIMGU_mgv1a000833mg [Erythranthe guttata] |
| COG | YP_004266283.1 | 1.00E-38 | ATPase P [Syntrophobotulus glycolicus DSM 8271] |
| Swissprot | tr|Q9SH30|HMA5_ARATH | 1.00E-56 | Probable copper-transporting ATPase HMA5 |
| trEMBL | tr|K4D924|K4D924_SOLLC | 7.00E-67 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc11g062120.1.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00966 | 100232 | 100687 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K17686 | copA, ATP7 | EC:3.6.3.54 | MAPK signaling pathway - plant | map04016 |
| Platinum drug resistance | map01524 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.160 |
| SRR1783600 | control | 0.121 |
| SRR1783602 | moderate drought stress | 0.084 |
| SRR1811619 | moderate drought stress | 0.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.300 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.126 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.142 |
| SRR8749032 | Uninduced | 0.388 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.221 |
| SRR8400027 | Control-Root | 0.104 |