Gene detail information of Glyur000972s00027760.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G15530.10Concanavalin A-like lectin protein kinase family protein
NRXP_007155476.10hypothetical protein PHAVU_003G204500g [Phaseolus vulgaris]
COGYP_001958461.17.00E-28hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9M9E0|LRKS1_ARATH0L-type lectin-domain containing receptor kinase S.1 (Precursor)
trEMBLtr|V7CDV5|V7CDV5_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW27470.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009724262644617-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.11.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000972s00027760.1PF00139.14Lectin_legB222655.70E-67
Glyur000972s00027760.1PF00069.20Pkinase3546208.90E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.444
SRR1783600control9.359
SRR1783602moderate drought stress13.415
SRR1811619moderate drought stress13.432

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.560
DRR006520Root Summer glycyrrhizin high producing strain12.553
DRR006521Root Winter glycyrrhizin high producing strain7.887
DRR006522Root Winter glycyrrhizin high producing strain7.999
DRR006523Root Summer glycyrrhizin low producing strain27.217
DRR006524Root Summer glycyrrhizin low producing strain27.416
DRR006525Leaf Summer glycyrrhizin high producing strain8.417
DRR006526Leaf Summer glycyrrhizin high producing strain8.605

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.163
SRR2868004Drought Stress(Tissue:root)28.406
SRR2967015Control (Tissue:root)27.498

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.842
SRR9715740Leave14.670
SRR9715741Leave7.073
SRR9715739Root38.190
SRR9715742Root10.444
SRR9715743Root16.309

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.896
SRR8749028MeJA induced 9h5.819
SRR8749029MeJA induced 9h3.046
SRR8749030Uninduced4.518
SRR8749031Uninduced1.891
SRR8749032Uninduced1.854

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.590
SRR8400027Control-Root11.395

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved