Gene detail information of Glyur000973s00026297.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G14760.10L-aspartate oxidase
NRXP_003618293.10L-aspartate oxidase [Medicago truncatula]
COGYP_003290584.10L-aspartate oxidase [Rhodothermus marinus DSM 4252]
Swissprottr|Q94AY1|NADB_ARATH0L-aspartate oxidase, chloroplastic (Precursor)
trEMBLtr|G7KIS1|G7KIS1_MEDTR0L-aspartate oxidase {ECO:0000313|EMBL:AES74511.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009734638752721-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00278nadB EC:1.4.3.16 Alanine, aspartate and glutamate metabolism map00250
Nicotinate and nicotinamide metabolismmap00760


Gene Ontology

biological_process

GO:0009435  NAD biosynthetic process

GO:0055114  oxidation-reduction process


cellular_component

GO:0005737  cytoplasm


molecular_function

GO:0008734  L-aspartate oxidase activity

GO:0016491  oxidoreductase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000973s00026297.1PF00890.19FAD_binding_21295136.10E-85
Glyur000973s00026297.1PF02910.15Succ_DH_flav_C5696621.50E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.816
SRR1783600control18.128
SRR1783602moderate drought stress12.109
SRR1811619moderate drought stress12.095

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.153
DRR006520Root Summer glycyrrhizin high producing strain18.157
DRR006521Root Winter glycyrrhizin high producing strain39.504
DRR006522Root Winter glycyrrhizin high producing strain38.451
DRR006523Root Summer glycyrrhizin low producing strain15.749
DRR006524Root Summer glycyrrhizin low producing strain15.765
DRR006525Leaf Summer glycyrrhizin high producing strain36.389
DRR006526Leaf Summer glycyrrhizin high producing strain36.715

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.567
SRR2868004Drought Stress(Tissue:root)19.376
SRR2967015Control (Tissue:root)18.414

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave19.311
SRR9715740Leave30.078
SRR9715741Leave19.100
SRR9715739Root11.613
SRR9715742Root15.597
SRR9715743Root14.330

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.764
SRR8749028MeJA induced 9h294.926
SRR8749029MeJA induced 9h233.534
SRR8749030Uninduced77.210
SRR8749031Uninduced246.227
SRR8749032Uninduced327.593

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.312
SRR8400027Control-Root21.192

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved