Gene detail information of Glyur000973s00026301.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G01500.31.00E-66carbonic anhydrase 1
NRXP_007151036.11.69E-153hypothetical protein PHAVU_004G013500g [Phaseolus vulgaris]
COGYP_114108.13.00E-24carbonic anhydrase [Methylococcus capsulatus str. Bath]
Swissprottr|P17067|CAHC_PEA3.00E-137Carbonic anhydrase, 25 kDa isoform (Precursor)
trEMBLtr|D2DWB7|D2DWB7_PHAVU6.00E-154Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009736698371372-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01673cynT, can EC:4.2.1.1 Nitrogen metabolism map00910


Gene Ontology

biological_process

GO:0015976  carbon utilization


molecular_function

GO:0004089  carbonate dehydratase activity

GO:0008270  zinc ion binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000973s00026301.1PF00484.14Pro_CA1302321.70E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.050
SRR1783600control0.050
SRR1783602moderate drought stress0.032
SRR1811619moderate drought stress0.033

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.571
DRR006520Root Summer glycyrrhizin high producing strain0.536
DRR006521Root Winter glycyrrhizin high producing strain0.550
DRR006522Root Winter glycyrrhizin high producing strain0.538
DRR006523Root Summer glycyrrhizin low producing strain0.219
DRR006524Root Summer glycyrrhizin low producing strain0.251
DRR006525Leaf Summer glycyrrhizin high producing strain2102.735
DRR006526Leaf Summer glycyrrhizin high producing strain2054.421

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.346
SRR2868004Drought Stress(Tissue:root)5.056
SRR2967015Control (Tissue:root)1.539

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1116.699
SRR9715740Leave1209.195
SRR9715741Leave490.555
SRR9715739Root0.471
SRR9715742Root0.746
SRR9715743Root0.435

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.002
SRR8400027Control-Root0.015

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved