Gene detail information of Glyur000975s00029566.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G37250.10Leucine-rich repeat protein kinase family protein
NRXP_004509103.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250-like [Cicer arietinum]
COGYP_004775215.17.00E-22RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGS3|Y4372_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g37250 (Precursor)
trEMBLtr|A0A072UNT7|A0A072UNT7_MEDTR0LRR receptor-like kinase {ECO:0000313|EMBL:KEH31489.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00975985413529-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000975s00029566.1PF08263.7LRRNT_235743.60E-10
Glyur000975s00029566.1PF00560.28LRR_11181390.013
Glyur000975s00029566.1PF12799.2LRR_41431771.60E-06
Glyur000975s00029566.1PF00560.28LRR_12132320.17
Glyur000975s00029566.1PF00560.28LRR_12372550.65
Glyur000975s00029566.1PF00069.20Pkinase4817723.60E-29


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control42.837
SRR1783600control43.063
SRR1783602moderate drought stress29.262
SRR1811619moderate drought stress29.272

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.588
DRR006520Root Summer glycyrrhizin high producing strain7.596
DRR006521Root Winter glycyrrhizin high producing strain0.455
DRR006522Root Winter glycyrrhizin high producing strain0.444
DRR006523Root Summer glycyrrhizin low producing strain11.231
DRR006524Root Summer glycyrrhizin low producing strain11.295
DRR006525Leaf Summer glycyrrhizin high producing strain4.177
DRR006526Leaf Summer glycyrrhizin high producing strain4.176

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)42.481
SRR2868004Drought Stress(Tissue:root)25.688
SRR2967015Control (Tissue:root)27.241

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave11.478
SRR9715740Leave7.187
SRR9715741Leave9.535
SRR9715739Root47.367
SRR9715742Root58.992
SRR9715743Root52.907

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.324
SRR8749028MeJA induced 9h10.037
SRR8749029MeJA induced 9h7.126
SRR8749030Uninduced6.896
SRR8749031Uninduced0.747
SRR8749032Uninduced0.725

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root49.735
SRR8400027Control-Root57.704

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved