Gene detail information of Glyur000975s00029578.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G23200.12.00E-169Protein kinase superfamily protein
NRKHN27061.10Putative receptor-like protein kinase [Glycine soja]
COGYP_008151634.17.00E-23hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|O22187|Y2232_ARATH0Probable receptor-like protein kinase At2g23200 (Precursor)
trEMBLtr|K7MM13|K7MM13_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G18180.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0097598527101076-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000975s00029578.1PF12819.2Malectin_like423994.20E-46
Glyur000975s00029578.1PF07714.12Pkinase_Tyr5067731.20E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.531
SRR1783600control4.539
SRR1783602moderate drought stress4.680
SRR1811619moderate drought stress4.702

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.109
DRR006520Root Summer glycyrrhizin high producing strain5.961
DRR006521Root Winter glycyrrhizin high producing strain1.590
DRR006522Root Winter glycyrrhizin high producing strain1.532
DRR006523Root Summer glycyrrhizin low producing strain8.865
DRR006524Root Summer glycyrrhizin low producing strain8.622
DRR006525Leaf Summer glycyrrhizin high producing strain32.874
DRR006526Leaf Summer glycyrrhizin high producing strain32.719

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.836
SRR2868004Drought Stress(Tissue:root)16.230
SRR2967015Control (Tissue:root)15.386

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave36.730
SRR9715740Leave32.186
SRR9715741Leave52.159
SRR9715739Root7.864
SRR9715742Root15.150
SRR9715743Root13.409

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.984
SRR8749028MeJA induced 9h4.339
SRR8749029MeJA induced 9h1.144
SRR8749030Uninduced2.194
SRR8749031Uninduced1.106
SRR8749032Uninduced1.027

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.180
SRR8400027Control-Root10.326

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved