Gene detail information of Glyur000977s00040609.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G77720.10putative protein kinase 1
NRXP_003614790.10Serine/threonine protein kinase [Medicago truncatula]
COGYP_006641017.15.00E-21serine/threonine-protein kinase pknB [Nocardiopsis alba ATCC BAA-2165]
Swissprottr|Q5QN75|M2K1_ORYSJ5.00E-23Mitogen-activated protein kinase kinase 1
trEMBLtr|G7K8X9|G7K8X9_MEDTR0Serine/Threonine kinase family protein {ECO:0000313|EMBL:AES97748.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009777436890538+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08866TTK, MPS1 EC:2.7.12.1 Cell cycle map04110
Cell cycle - yeastmap04111


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000977s00040609.1PF00069.20Pkinase2605533.90E-54


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.226
SRR1783600control1.250
SRR1783602moderate drought stress1.391
SRR1811619moderate drought stress1.380

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.202
DRR006520Root Summer glycyrrhizin high producing strain2.310
DRR006521Root Winter glycyrrhizin high producing strain0.934
DRR006522Root Winter glycyrrhizin high producing strain0.957
DRR006523Root Summer glycyrrhizin low producing strain1.962
DRR006524Root Summer glycyrrhizin low producing strain1.859
DRR006525Leaf Summer glycyrrhizin high producing strain0.892
DRR006526Leaf Summer glycyrrhizin high producing strain0.911

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.906
SRR2868004Drought Stress(Tissue:root)4.823
SRR2967015Control (Tissue:root)6.288

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.595
SRR9715740Leave1.278
SRR9715741Leave1.457
SRR9715739Root0.450
SRR9715742Root1.343
SRR9715743Root1.226

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.613
SRR8749028MeJA induced 9h4.001
SRR8749029MeJA induced 9h2.578
SRR8749030Uninduced1.499
SRR8749031Uninduced0.891
SRR8749032Uninduced0.764

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.773
SRR8400027Control-Root5.613

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved