Gene detail information of Glyur000978s00031817.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G26220.14.00E-63Acyl-CoA N-acyltransferases (NAT) superfamily protein
NRXP_004490320.12.77E-103PREDICTED: uncharacterized N-acetyltransferase ycf52-like [Cicer arietinum]
COGYP_007134888.12.00E-28GCN5-related N-acetyltransferase [Stanieria cyanosphaera PCC 7437]
Swissprottr|Q1XDU5|YCF52_PYRYE3.00E-33Uncharacterized N-acetyltransferase ycf52
trEMBLtr|G7ICB6|G7ICB6_MEDTR1.00E-92Uncharacterized protein {ECO:0000313|EMBL:AFK47766.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009782023822288+


Gene family

Gene familysubfamily
Transcription Factors FamilyGNAT


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0008080  N-acetyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000978s00031817.1PF00583.19Acetyltransf_11051742.70E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.158
SRR1783600control0.154
SRR1783602moderate drought stress0.405
SRR1811619moderate drought stress0.460

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.437
DRR006520Root Summer glycyrrhizin high producing strain0.480
DRR006521Root Winter glycyrrhizin high producing strain0.258
DRR006522Root Winter glycyrrhizin high producing strain0.292
DRR006523Root Summer glycyrrhizin low producing strain0.285
DRR006524Root Summer glycyrrhizin low producing strain0.205
DRR006525Leaf Summer glycyrrhizin high producing strain7.237
DRR006526Leaf Summer glycyrrhizin high producing strain7.474

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.913
SRR2868004Drought Stress(Tissue:root)1.351
SRR2967015Control (Tissue:root)0.880

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.778
SRR9715740Leave14.355
SRR9715741Leave11.946
SRR9715739Root0.325
SRR9715742Root1.197
SRR9715743Root1.485

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.048
SRR8749028MeJA induced 9h0.549
SRR8749029MeJA induced 9h0.722
SRR8749030Uninduced0.238
SRR8749031Uninduced0.071
SRR8749032Uninduced0.526

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root1.163
SRR8400027Control-Root1.752

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved