Gene detail information of Glyur000983s00021689.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G28310.23.00E-25Dof-type zinc finger DNA-binding family protein
NRXP_007159297.17.55E-123hypothetical protein PHAVU_002G226100g [Phaseolus vulgaris]
Swissprottr|O24463|PBF_MAIZE4.00E-29Dof zinc finger protein PBF
trEMBLtr|V7CQU0|V7CQU0_PHAVU3.00E-123Uncharacterized protein {ECO:0000313|EMBL:ESW31291.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009835163152509-


Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-Dof


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000983s00021689.1PF02701.10zf-Dof501081.70E-33


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.180
SRR1783600control21.476
SRR1783602moderate drought stress23.722
SRR1811619moderate drought stress22.101

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.168
DRR006520Root Summer glycyrrhizin high producing strain15.267
DRR006521Root Winter glycyrrhizin high producing strain8.740
DRR006522Root Winter glycyrrhizin high producing strain8.759
DRR006523Root Summer glycyrrhizin low producing strain26.469
DRR006524Root Summer glycyrrhizin low producing strain30.970
DRR006525Leaf Summer glycyrrhizin high producing strain10.273
DRR006526Leaf Summer glycyrrhizin high producing strain10.337

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.902
SRR2868004Drought Stress(Tissue:root)42.477
SRR2967015Control (Tissue:root)17.777

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.576
SRR9715740Leave10.754
SRR9715741Leave12.811
SRR9715739Root9.832
SRR9715742Root31.507
SRR9715743Root24.911

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.591
SRR8749028MeJA induced 9h31.526
SRR8749029MeJA induced 9h19.452
SRR8749030Uninduced46.709
SRR8749031Uninduced46.017
SRR8749032Uninduced18.826

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.547
SRR8400027Control-Root19.034

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved