Gene detail information of Glyur000983s00021692.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G45100.21.00E-129UDP-Glycosyltransferase superfamily protein
NRXP_003541541.12.66E-176PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit A-like isoform X1 [Glycine max]
COGNP_615757.14.00E-18N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein [Methanosarcina acetivorans C2A]
trEMBLtr|I1M0D4|I1M0D4_SOYBN1.00E-176Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G25060.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009837325778527-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03857PIGA, GPI3 EC:2.4.1.198 Glycosylphosphatidylinositol(GPI)-anchor biosynthesis map00563


Gene Ontology

biological_process

GO:0006506  GPI anchor biosynthetic process

GO:0009058  biosynthetic process



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000983s00021692.1PF08288.7PIGA531231.50E-28
Glyur000983s00021692.1PF00534.15Glycos_transf_11883231.90E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.301
SRR1783600control1.257
SRR1783602moderate drought stress5.708
SRR1811619moderate drought stress5.562

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain1.966
DRR006520Root Summer glycyrrhizin high producing strain2.076
DRR006521Root Winter glycyrrhizin high producing strain2.987
DRR006522Root Winter glycyrrhizin high producing strain3.165
DRR006523Root Summer glycyrrhizin low producing strain1.775
DRR006524Root Summer glycyrrhizin low producing strain1.456
DRR006525Leaf Summer glycyrrhizin high producing strain1.118
DRR006526Leaf Summer glycyrrhizin high producing strain1.040

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.442
SRR2868004Drought Stress(Tissue:root)5.215
SRR2967015Control (Tissue:root)3.887

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.212
SRR9715740Leave1.347
SRR9715741Leave2.552
SRR9715739Root0.418
SRR9715742Root0.914
SRR9715743Root0.546

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.643
SRR8749028MeJA induced 9h2.434
SRR8749029MeJA induced 9h1.857
SRR8749030Uninduced1.358
SRR8749031Uninduced1.120
SRR8749032Uninduced1.360

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.489
SRR8400027Control-Root6.921

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved