Gene detail information of Glyur000986s00028870.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G29660.1 | 6.00E-85 | zinc finger (C2H2 type) family protein |
| NR | XP_004500239.1 | 0 | PREDICTED: uncharacterized protein LOC101489748 [Cicer arietinum] |
| trEMBL | tr|G7ZYI5|G7ZYI5_MEDTR | 0 | C2H2-like zinc finger protein {ECO:0000313|EMBL:KEH34223.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00986 | 19840 | 21042 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2H2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 174.649 |
| SRR1783600 | control | 182.757 |
| SRR1783602 | moderate drought stress | 102.297 |
| SRR1811619 | moderate drought stress | 102.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 100.799 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 96.815 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.104 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.027 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 131.179 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 131.350 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.767 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 127.992 |
| SRR2868004 | Drought Stress(Tissue:root) | 103.613 |
| SRR2967015 | Control (Tissue:root) | 104.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 40.575 |
| SRR9715740 | Leave | 21.790 |
| SRR9715741 | Leave | 31.698 |
| SRR9715739 | Root | 83.242 |
| SRR9715742 | Root | 100.965 |
| SRR9715743 | Root | 90.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 26.244 |
| SRR8749028 | MeJA induced 9h | 21.777 |
| SRR8749029 | MeJA induced 9h | 19.437 |
| SRR8749030 | Uninduced | 6.120 |
| SRR8749031 | Uninduced | 5.106 |
| SRR8749032 | Uninduced | 5.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 78.751 |
| SRR8400027 | Control-Root | 105.596 |