Gene detail information of Glyur000986s00028872.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58860.10cytochrome P450, family 86, subfamily A, polypeptide 1
NRXP_004500237.10PREDICTED: cytochrome P450 86A1-like [Cicer arietinum]
COGYP_004862454.11.00E-36Cytochrome P450 [Candidatus Chloracidobacterium thermophilum B]
Swissprottr|P48422|C86A1_ARATH0Cytochrome P450 86A1
trEMBLtr|A0A072UWJ2|A0A072UWJ2_MEDTR0Cytochrome P450 family-dependent fatty acid hydroxylase {ECO:0000313|EMBL:KEH34209.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009863979142346-


Gene family

Gene familysubfamily
Cytochrome P450 FamilyCYP86A1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K15401CYP86A1 EC:1.14.-.- Cutin, suberine and wax biosynthesis map00073


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003924  GTPase activity

GO:0005506  iron ion binding

GO:0016705  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000986s00028872.1PF00067.17p450945091.40E-63
Glyur000986s00028872.1PF00091.20Tubulin5405742.70E-05


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.151
SRR1783600control18.614
SRR1783602moderate drought stress14.128
SRR1811619moderate drought stress14.507

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.445
DRR006520Root Summer glycyrrhizin high producing strain0.435
DRR006521Root Winter glycyrrhizin high producing strain0.409
DRR006522Root Winter glycyrrhizin high producing strain0.377
DRR006523Root Summer glycyrrhizin low producing strain0.335
DRR006524Root Summer glycyrrhizin low producing strain0.455
DRR006525Leaf Summer glycyrrhizin high producing strain1.302
DRR006526Leaf Summer glycyrrhizin high producing strain1.274

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)76.760
SRR2868004Drought Stress(Tissue:root)45.527
SRR2967015Control (Tissue:root)36.989

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.484
SRR9715740Leave0.534
SRR9715741Leave1.046
SRR9715739Root75.826
SRR9715742Root23.300
SRR9715743Root32.510

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.134
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.110
SRR8749031Uninduced0.060
SRR8749032Uninduced0.131

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root103.079
SRR8400027Control-Root98.404

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved