Gene detail information of Glyur000986s00028882.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58900.1 | 7.00E-68 | Homeodomain-like transcriptional regulator |
| NR | XP_007146740.1 | 0 | hypothetical protein PHAVU_006G065700g [Phaseolus vulgaris] |
| Swissprot | tr|Q8S9H7|DIV_ANTMA | 4.00E-119 | Transcription factor DIVARICATA |
| trEMBL | tr|V7BL84|V7BL84_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW18734.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00986 | 90650 | 93386 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000986s00028882.1 | PF00249.26 | Myb_DNA-binding | 39 | 83 | 4.70E-06 |
| Glyur000986s00028882.1 | PF00249.26 | Myb_DNA-binding | 145 | 189 | 1.10E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 45.520 |
| SRR1783600 | control | 45.929 |
| SRR1783602 | moderate drought stress | 31.827 |
| SRR1811619 | moderate drought stress | 31.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 43.853 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 43.238 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.189 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.175 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 44.587 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 44.996 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.107 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 36.958 |
| SRR2868004 | Drought Stress(Tissue:root) | 26.216 |
| SRR2967015 | Control (Tissue:root) | 33.271 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 13.285 |
| SRR9715740 | Leave | 20.583 |
| SRR9715741 | Leave | 17.415 |
| SRR9715739 | Root | 18.222 |
| SRR9715742 | Root | 21.029 |
| SRR9715743 | Root | 19.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.221 |
| SRR8749028 | MeJA induced 9h | 11.027 |
| SRR8749029 | MeJA induced 9h | 6.179 |
| SRR8749030 | Uninduced | 11.793 |
| SRR8749031 | Uninduced | 2.974 |
| SRR8749032 | Uninduced | 1.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 51.695 |
| SRR8400027 | Control-Root | 55.315 |