Gene detail information of Glyur000988s00029109.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G52890.22.00E-122KCBP-interacting protein kinase
NRAES68570.20Serine/Threonine-kinase KIPK-like protein [Medicago truncatula]
COGYP_004179918.11.00E-12serine/threonine protein kinase [Isosphaera pallida ATCC 43644]
Swissprottr|Q9LFA2|KIPK_ARATH7.00E-152Serine/threonine-protein kinase KIPK
trEMBLtr|G7J0G5|G7J0G5_MEDTR0Serine/Threonine-kinase KIPK-like protein {ECO:0000313|EMBL:AES68570.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009881064213592+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.6


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000988s00029109.1PF00069.20Pkinase3634363.30E-19
Glyur000988s00029109.1PF00069.20Pkinase5136081.60E-17


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.752
SRR1783600control10.883
SRR1783602moderate drought stress19.160
SRR1811619moderate drought stress19.294

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.801
DRR006520Root Summer glycyrrhizin high producing strain18.841
DRR006521Root Winter glycyrrhizin high producing strain11.750
DRR006522Root Winter glycyrrhizin high producing strain11.741
DRR006523Root Summer glycyrrhizin low producing strain19.926
DRR006524Root Summer glycyrrhizin low producing strain20.127
DRR006525Leaf Summer glycyrrhizin high producing strain3.759
DRR006526Leaf Summer glycyrrhizin high producing strain3.788

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.329
SRR2868004Drought Stress(Tissue:root)9.537
SRR2967015Control (Tissue:root)12.545

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.697
SRR9715740Leave6.124
SRR9715741Leave8.844
SRR9715739Root5.666
SRR9715742Root17.258
SRR9715743Root15.981

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.721
SRR8749028MeJA induced 9h6.971
SRR8749029MeJA induced 9h3.199
SRR8749030Uninduced3.687
SRR8749031Uninduced0.964
SRR8749032Uninduced1.401

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.853
SRR8400027Control-Root12.496

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved