Gene detail

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Gene detail information of Glyur000989s00020266.3

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G67850.2	1.00E-151	Protein of unknown function (DUF707)
NR	XP_003531333.1	0	PREDICTED: uncharacterized protein LOC100805311 [Glycine max]
COG	YP_001940717.1	1.00E-07	hypothetical protein Minf_2066 [Methylacidiphilum infernorum V4]
trEMBL	tr\|I1KSX5\|I1KSX5_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA08G14040.1}

Sequence

Transcript Sequence

>Glyur000989s00020266.3
ATGTTGCTCCTAAATCAGAAAACAAACCCAAACCTGAGAGAGAAGGTTCCATAGTACAATTGCTGCTGCTTCGTTGTTTTTCACGTTCGTTCCGCTCCTCGAAAAACTCGATCGCTACCAACATCACCACAGACCCTCAGATTTCAGTGTCAGCAACCACCGAGGTGTTGTTGTTTTTGCCAGATCTTGCTGCGTGCTGCTATTAAAGCTATTCCAGGGCTTGTTTTCTTATAACAAGCATCTTTGCATCTTATATGGAGGATACGTGCTTCTTGGTACATAGTGAAGAATAGCTTATCTGTATAGTTTTATGAGCATACAATCAGAAAAGCTTGGATATAATGGGGATTGGTACTCGCAGTTCTACCAATAGAAAACCAAGCGAGAGTATGAGGCTTATTGTGACAACTTTCGTTGGAATAGTTTTTGGCTTCTTTATAGGGATATCATTTCCGGCATTAACTACAAAGTTGAATCTCCCATCCCACCTGCTTCCCTCCATTGATGTCTCTTACGTTGAAGACAAATATGTAGGTGGCAATGCACAGTCTTTTATGAAGAATAATAACAGCACCTCAACCAAATATCAGTTATTAAATGATACTTTGAAGATTTGGGTTCCATCAAATCCAAGAGGTGCAGAAAGATTACCTCCTGCGATAATAGATGCTGAGTCGGACTTTTATTTGCGCAGATTGTGGGGACAGCCCAGTGAGGATTTAACCTCAAANCCGAAGTACCTTGTGACCTTCACTGTCGGTTATGACCAGAAATATAATATTGATGCAGCTGTGAAAAAGTTTTCAGAGAATTTCACAATACTTCTATTTCATTATGATGGCCAAACAACTGAATGGGATGAGTTTGAGTGGTCAAAGCAGGCTATTCATGTGAGTGTTCACAAGCAGACAAAATGGTGGTATGCTAAACGGTTTCTNCATCCTGACATTGTGGCACCATATGACTATATTTTTATATGGGATGAGGACCTGGGTGTTGAGCATTTTAATGCAGAGGAATACTTAAAACTGGTCAGGAAGCATGGGTTGGAGATTTCACAGCCTGGTCTGGAACCTAATAATGGGTTGACATGGCAAATGACAAAGAGAAGAGGTGATCGTGAAGTTCACAAAGTAACAGAGGAGAAACCAGGATGGTGCAGTGACCCTCACCTGCCTCCTTGTGCAGCGTTTGTTGAGATTATGGCTCCAGTGTTTTCACGAGATGCATGGCGCTGTGTGTGGCATATGATTCAGAATGACTTGGTCCATGGGTGGGGTCTTGACTTTGCTCTTAGAAAATGTGTTGAGCCGGCCCATGAGAAGATAGGAGTTGTTGATTCTCAGTGGATTGTTCATCAAAGTATTCCCTCACTAGGGAATCAGGGACAAGCAGAATCTGGGAAAGCACCATGGCATGGGAAAAGCTTGGATATAATGGGGTCCCTTACTCGAAGTTCTTCTTCTACCAAGAGAAAACCAAATGAAAGTATGAGGCTTATTGTGATCTTCTTCATTGGAGGAATTTCAGGNTTAATTATAGGAGTATCGCTCCCAATTACATTTCCAACAACAAAGGTGTGCTGNAATTGAGTGCTTTAGTGAACTTTTATTCATGTCTTGATGTTGTTTAGCTTCAGAATGGAACTCTTAACTGTGCTTAAAATTTTTTCAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00989	72578	84373	+

Gene family

Gene family	subfamily
Carbohydrate-Active enzymes Family	GTnc

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000989s00020266.3	PF05212.7	DUF707	91	360	2.10E-151

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.662
SRR1783600	control	9.843
SRR1783602	moderate drought stress	8.405
SRR1811619	moderate drought stress	8.293

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	10.889
DRR006520	Root Summer glycyrrhizin high producing strain	10.733
DRR006521	Root Winter glycyrrhizin high producing strain	9.649
DRR006522	Root Winter glycyrrhizin high producing strain	9.051
DRR006523	Root Summer glycyrrhizin low producing strain	8.772
DRR006524	Root Summer glycyrrhizin low producing strain	8.453
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.348
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.326

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	23.196
SRR2868004	Drought Stress(Tissue:root)	17.635
SRR2967015	Control (Tissue:root)	17.453

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	7.707
SRR9715740	Leave	14.762
SRR9715741	Leave	7.047
SRR9715739	Root	2.971
SRR9715742	Root	5.861
SRR9715743	Root	5.303

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	181.826
SRR8749028	MeJA induced 9h	166.122
SRR8749029	MeJA induced 9h	179.564
SRR8749030	Uninduced	65.925
SRR8749031	Uninduced	43.406
SRR8749032	Uninduced	48.053

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	21.097
SRR8400027	Control-Root	19.230