Gene detail information of Glyur000989s00020269.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12990.10beta-1,4-N-acetylglucosaminyltransferase family protein
NRKEH20776.10beta-1,4-N-acetylglucosaminyltransferase-like protein [Medicago truncatula]
trEMBLtr|A0A072TUB7|A0A072TUB7_MEDTR0Beta-1,4-N-acetylglucosaminyltransferase-like protein {ECO:0000313|EMBL:KEH20776.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009898966892582-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT17


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00737MGAT3 EC:2.4.1.144 N-Glycan biosynthesis map00510


Gene Ontology

biological_process

GO:0006487  protein N-linked glycosylation


cellular_component

GO:0016020  membrane


molecular_function

GO:0003830  beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000989s00020269.1PF04724.8Glyco_transf_17333901.80E-180


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.723
SRR1783600control7.740
SRR1783602moderate drought stress6.189
SRR1811619moderate drought stress6.161

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain77.157
DRR006520Root Summer glycyrrhizin high producing strain76.209
DRR006521Root Winter glycyrrhizin high producing strain19.534
DRR006522Root Winter glycyrrhizin high producing strain19.376
DRR006523Root Summer glycyrrhizin low producing strain109.260
DRR006524Root Summer glycyrrhizin low producing strain109.412
DRR006525Leaf Summer glycyrrhizin high producing strain21.088
DRR006526Leaf Summer glycyrrhizin high producing strain21.047

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.876
SRR2868004Drought Stress(Tissue:root)16.148
SRR2967015Control (Tissue:root)33.424

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave68.794
SRR9715740Leave57.473
SRR9715741Leave62.555
SRR9715739Root88.951
SRR9715742Root150.335
SRR9715743Root138.697

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h146.292
SRR8749028MeJA induced 9h156.457
SRR8749029MeJA induced 9h128.713
SRR8749030Uninduced140.828
SRR8749031Uninduced108.207
SRR8749032Uninduced79.694

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.684
SRR8400027Control-Root25.824

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved