Gene detail information of Glyur000994s00025831.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G11090.19.00E-132alpha/beta-Hydrolases superfamily protein
NRAFK35254.10unknown [Medicago truncatula]
COGYP_003571913.15.00E-36lysophospholipase [Salinibacter ruber M8]
Swissprottr|Q9C942|CSE_ARATH2.00E-73Caffeoylshikimate esterase
trEMBLtr|I3S4R2|I3S4R2_MEDTR0Uncharacterized protein {ECO:0000313|EMBL:AFK35254.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009946688867880-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01054MGLL EC:3.1.1.23 Glycerolipid metabolism map00561
Regulation of lipolysis in adipocytemap04923
Retrograde endocannabinoid signalingmap04723


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000994s00025831.1PF12695.2Abhydrolase_5652977.00E-19


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control13.733
SRR1783600control13.756
SRR1783602moderate drought stress23.420
SRR1811619moderate drought stress24.268

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.980
DRR006520Root Summer glycyrrhizin high producing strain16.976
DRR006521Root Winter glycyrrhizin high producing strain17.166
DRR006522Root Winter glycyrrhizin high producing strain16.593
DRR006523Root Summer glycyrrhizin low producing strain15.629
DRR006524Root Summer glycyrrhizin low producing strain15.853
DRR006525Leaf Summer glycyrrhizin high producing strain29.493
DRR006526Leaf Summer glycyrrhizin high producing strain28.925

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.720
SRR2868004Drought Stress(Tissue:root)24.428
SRR2967015Control (Tissue:root)30.559

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.086
SRR9715740Leave32.644
SRR9715741Leave21.147
SRR9715739Root23.497
SRR9715742Root12.938
SRR9715743Root14.280

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.710
SRR8749028MeJA induced 9h12.286
SRR8749029MeJA induced 9h18.270
SRR8749030Uninduced9.832
SRR8749031Uninduced5.535
SRR8749032Uninduced8.797

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.202
SRR8400027Control-Root15.061

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved