Gene detail information of Glyur000999s00024085.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39410.1 | 1.00E-12 | WRKY DNA-binding protein 13 |
| NR | XP_007137584.1 | 4.79E-67 | hypothetical protein PHAVU_009G138600g [Phaseolus vulgaris] |
| Swissprot | tr|Q9SVB7|WRK13_ARATH | 3.00E-22 | Probable WRKY transcription factor 13 |
| trEMBL | tr|V7AY82|V7AY82_PHAVU | 2.00E-67 | Uncharacterized protein {ECO:0000313|EMBL:ESW09578.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00999 | 11872 | 13944 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000999s00024085.1 | PF03106.10 | WRKY | 150 | 165 | 6.30E-05 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.715 |
| SRR1783600 | control | 11.954 |
| SRR1783602 | moderate drought stress | 17.239 |
| SRR1811619 | moderate drought stress | 16.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 52.647 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 52.313 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.647 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.039 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.475 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.261 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.863 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 5.490 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.809 |
| SRR2967015 | Control (Tissue:root) | 6.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.037 |
| SRR9715740 | Leave | 0.837 |
| SRR9715741 | Leave | 0.588 |
| SRR9715739 | Root | 1.697 |
| SRR9715742 | Root | 6.585 |
| SRR9715743 | Root | 6.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.156 |
| SRR8749029 | MeJA induced 9h | 0.212 |
| SRR8749030 | Uninduced | 0.074 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.183 |
| SRR8400027 | Control-Root | 14.946 |