Gene detail information of Glyur000999s00024103.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G64860.10disproportionating enzyme
NRKHN48378.104-alpha-glucanotransferase, chloroplastic/amyloplastic [Glycine soja]
COGYP_003319332.11.00E-1524-alpha-glucanotransferase [Sphaerobacter thermophilus DSM 20745]
Swissprottr|Q06801|DPEP_SOLTU04-alpha-glucanotransferase, chloroplastic/amyloplastic (Precursor)
trEMBLtr|I1KBB6|I1KBB6_SOYBN04-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold009998749593418-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH77


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00705malQ EC:2.4.1.25 Starch and sucrose metabolism map00500


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004134  4-alpha-glucanotransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000999s00024103.1PF02446.12Glyco_hydro_77905745.20E-151


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control58.048
SRR1783600control58.612
SRR1783602moderate drought stress41.159
SRR1811619moderate drought stress40.423

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain73.509
DRR006520Root Summer glycyrrhizin high producing strain72.260
DRR006521Root Winter glycyrrhizin high producing strain12.584
DRR006522Root Winter glycyrrhizin high producing strain12.277
DRR006523Root Summer glycyrrhizin low producing strain40.018
DRR006524Root Summer glycyrrhizin low producing strain39.755
DRR006525Leaf Summer glycyrrhizin high producing strain21.886
DRR006526Leaf Summer glycyrrhizin high producing strain21.344

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)42.099
SRR2868004Drought Stress(Tissue:root)30.270
SRR2967015Control (Tissue:root)30.936

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.118
SRR9715740Leave20.970
SRR9715741Leave19.948
SRR9715739Root25.040
SRR9715742Root49.971
SRR9715743Root44.206

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.173
SRR8749028MeJA induced 9h9.524
SRR8749029MeJA induced 9h6.447
SRR8749030Uninduced1.634
SRR8749031Uninduced0.684
SRR8749032Uninduced1.145

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root73.556
SRR8400027Control-Root68.220

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved