Gene detail information of Glyur001001s00027980.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G03980.12.00E-90NAD(P)-binding Rossmann-fold superfamily protein
NRXP_004489710.12.63E-156PREDICTED: short-chain type dehydrogenase/reductase-like [Cicer arietinum]
COGYP_001602914.15.00E-69oxidoreductase [Gluconacetobacter diazotrophicus PAl 5]
Swissprottr|Q08632|SDR1_PICAB2.00E-102Short-chain type dehydrogenase/reductase
trEMBLtr|V7CX19|V7CX19_PHAVU3.00E-139Uncharacterized protein {ECO:0000313|EMBL:ESW33923.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010014055841391-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00059fabG EC:1.1.1.100 Fatty acid metabolism map01212
Fatty acid biosynthesismap00061
Biosynthesis of unsaturated fatty acidsmap01040
Biotin metabolismmap00780


Gene Ontology

biological_process

GO:0008152  metabolic process


molecular_function

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001001s00027980.1PF00106.20adh_short242032.10E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control159.493
SRR1783600control159.971
SRR1783602moderate drought stress141.771
SRR1811619moderate drought stress140.875

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain83.714
DRR006520Root Summer glycyrrhizin high producing strain80.809
DRR006521Root Winter glycyrrhizin high producing strain51.742
DRR006522Root Winter glycyrrhizin high producing strain48.673
DRR006523Root Summer glycyrrhizin low producing strain165.519
DRR006524Root Summer glycyrrhizin low producing strain163.679
DRR006525Leaf Summer glycyrrhizin high producing strain25.225
DRR006526Leaf Summer glycyrrhizin high producing strain24.275

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)101.146
SRR2868004Drought Stress(Tissue:root)75.827
SRR2967015Control (Tissue:root)103.661

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave77.408
SRR9715740Leave82.079
SRR9715741Leave77.863
SRR9715739Root261.567
SRR9715742Root131.613
SRR9715743Root150.049

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h36.686
SRR8749028MeJA induced 9h27.407
SRR8749029MeJA induced 9h20.802
SRR8749030Uninduced8.443
SRR8749031Uninduced3.016
SRR8749032Uninduced9.735

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root105.587
SRR8400027Control-Root96.358

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved