Gene detail information of Glyur001002s00038917.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G80460.10Actin-like ATPase superfamily protein
NRXP_003604353.10Glycerol kinase [Medicago truncatula]
COGYP_003198956.10glycerol kinase [Desulfohalobium retbaense DSM 5692]
Swissprottr|Q9M8L4|GLPK_ARATH0Glycerol kinase
trEMBLtr|G7JGV7|G7JGV7_MEDTR0Glycerol kinase-like protein {ECO:0000313|EMBL:AES86550.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010025728361108+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00864glpK, GK EC:2.7.1.30 Glycerolipid metabolism map00561
PPAR signaling pathwaymap03320
Plant-pathogen interactionmap04626


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0006072  glycerol-3-phosphate metabolic process


molecular_function

GO:0004370  glycerol kinase activity

GO:0016773  phosphotransferase activity, alcohol group as acceptor


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001002s00038917.1PF00370.16FGGY_N82623.60E-69
Glyur001002s00038917.1PF02782.11FGGY_C2704676.90E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.840
SRR1783600control8.035
SRR1783602moderate drought stress9.583
SRR1811619moderate drought stress9.569

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.671
DRR006520Root Summer glycyrrhizin high producing strain5.573
DRR006521Root Winter glycyrrhizin high producing strain4.301
DRR006522Root Winter glycyrrhizin high producing strain4.112
DRR006523Root Summer glycyrrhizin low producing strain4.882
DRR006524Root Summer glycyrrhizin low producing strain5.401
DRR006525Leaf Summer glycyrrhizin high producing strain15.608
DRR006526Leaf Summer glycyrrhizin high producing strain16.202

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)38.056
SRR2868004Drought Stress(Tissue:root)49.126
SRR2967015Control (Tissue:root)54.785

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.697
SRR9715740Leave23.156
SRR9715741Leave28.005
SRR9715739Root2.941
SRR9715742Root7.977
SRR9715743Root6.047

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h31.753
SRR8749028MeJA induced 9h59.732
SRR8749029MeJA induced 9h24.673
SRR8749030Uninduced31.616
SRR8749031Uninduced51.825
SRR8749032Uninduced29.397

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root27.663
SRR8400027Control-Root25.357

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved