Gene detail information of Glyur001005s00027808.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G56890.10Protein kinase superfamily protein
NRXP_006593912.10PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like isoform X4 [Glycine max]
COGYP_004092358.16.00E-27serine/threonine protein kinase with PASTA sensor(s) [Ethanoligenens harbinense YUAN-3]
Swissprottr|Q8RWW0|ALE2_ARATH0Receptor-like serine/threonine-protein kinase ALE2 (Precursor)
trEMBLtr|K7LYT7|K7LYT7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G16280.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01005115013153-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001005s00027808.1PF07714.12Pkinase_Tyr87211428.00E-48
Glyur001005s00027808.1PF05251.7UPF0197127913484.30E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control42.782
SRR1783600control43.467
SRR1783602moderate drought stress31.668
SRR1811619moderate drought stress31.908

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.509
DRR006520Root Summer glycyrrhizin high producing strain28.922
DRR006521Root Winter glycyrrhizin high producing strain11.087
DRR006522Root Winter glycyrrhizin high producing strain11.091
DRR006523Root Summer glycyrrhizin low producing strain20.662
DRR006524Root Summer glycyrrhizin low producing strain20.463
DRR006525Leaf Summer glycyrrhizin high producing strain6.994
DRR006526Leaf Summer glycyrrhizin high producing strain7.071

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.896
SRR2868004Drought Stress(Tissue:root)17.928
SRR2967015Control (Tissue:root)17.496

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.056
SRR9715740Leave10.219
SRR9715741Leave8.984
SRR9715739Root12.137
SRR9715742Root20.367
SRR9715743Root18.218

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.000
SRR8749028MeJA induced 9h11.343
SRR8749029MeJA induced 9h8.187
SRR8749030Uninduced3.152
SRR8749031Uninduced1.887
SRR8749032Uninduced2.471

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root57.984
SRR8400027Control-Root57.004

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved