Gene detail information of Glyur001005s00027819.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G56960.1 | 3.00E-43 | basic helix-loop-helix (bHLH) DNA-binding family protein |
| NR | XP_003547476.1 | 9.37E-158 | PREDICTED: putative transcription factor bHLH041-like isoform X1 [Glycine max] |
| Swissprot | tr|Q9LTS4|BH041_ARATH | 1.00E-50 | Putative transcription factor bHLH041 |
| trEMBL | tr|K7MBY3|K7MBY3_SOYBN | 3.00E-158 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G18580.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01005 | 93111 | 97265 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | bHLH |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001005s00027819.1 | PF00010.21 | HLH | 382 | 427 | 1.00E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.021 |
| SRR1783600 | control | 0.021 |
| SRR1783602 | moderate drought stress | 0.065 |
| SRR1811619 | moderate drought stress | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.053 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.120 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.127 |
| SRR2967015 | Control (Tissue:root) | 0.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.407 |
| SRR9715740 | Leave | 0.429 |
| SRR9715741 | Leave | 1.937 |
| SRR9715739 | Root | 0.014 |
| SRR9715742 | Root | 0.129 |
| SRR9715743 | Root | 0.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.122 |
| SRR8749028 | MeJA induced 9h | 1.225 |
| SRR8749029 | MeJA induced 9h | 0.104 |
| SRR8749030 | Uninduced | 2.534 |
| SRR8749031 | Uninduced | 0.218 |
| SRR8749032 | Uninduced | 0.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.431 |
| SRR8400027 | Control-Root | 0.347 |