Gene detail information of Glyur001006s00028646.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G11670.10UDP-Glycosyltransferase superfamily protein
NRXP_004497656.10PREDICTED: digalactosyldiacylglycerol synthase 1, chloroplastic-like isoform X1 [Cicer arietinum]
COGNP_489381.16.00E-07hypothetical protein all5341 [Nostoc sp. PCC 7120]
Swissprottr|Q6DW76|DGDG1_SOYBN0Digalactosyldiacylglycerol synthase 1, chloroplastic (Precursor)
trEMBLtr|V7CXV9|V7CXV9_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW34964.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010061286119118-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09480E2.4.1.241 EC:2.4.1.241 Glycerolipid metabolism map00561


Gene Ontology

biological_process

GO:0009058  biosynthetic process



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001006s00028646.2PF00534.15Glycos_transf_15757142.10E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.044
SRR1783600control5.962
SRR1783602moderate drought stress9.807
SRR1811619moderate drought stress9.796

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.514
DRR006520Root Summer glycyrrhizin high producing strain6.266
DRR006521Root Winter glycyrrhizin high producing strain1.428
DRR006522Root Winter glycyrrhizin high producing strain1.512
DRR006523Root Summer glycyrrhizin low producing strain1.874
DRR006524Root Summer glycyrrhizin low producing strain1.913
DRR006525Leaf Summer glycyrrhizin high producing strain6.023
DRR006526Leaf Summer glycyrrhizin high producing strain5.972

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.038
SRR2868004Drought Stress(Tissue:root)15.666
SRR2967015Control (Tissue:root)17.146

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.792
SRR9715740Leave9.525
SRR9715741Leave12.683
SRR9715739Root2.502
SRR9715742Root6.155
SRR9715743Root5.469

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.314
SRR8749028MeJA induced 9h2.536
SRR8749029MeJA induced 9h1.258
SRR8749030Uninduced0.249
SRR8749031Uninduced0.453
SRR8749032Uninduced0.688

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.772
SRR8400027Control-Root10.543

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved