Gene detail information of Glyur001007s00026101.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007153030.1 | 1.22E-24 | hypothetical protein PHAVU_003G001600g [Phaseolus vulgaris] |
| trEMBL | tr|V7C4E9|V7C4E9_PHAVU | 5.00E-25 | Uncharacterized protein {ECO:0000313|EMBL:ESW25024.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01007 | 62371 | 62865 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.966 |
| SRR1783600 | control | 28.157 |
| SRR1783602 | moderate drought stress | 20.268 |
| SRR1811619 | moderate drought stress | 22.119 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.506 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.340 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.063 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.256 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.635 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.441 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.932 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.779 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 23.398 |
| SRR2868004 | Drought Stress(Tissue:root) | 26.888 |
| SRR2967015 | Control (Tissue:root) | 28.592 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.927 |
| SRR9715740 | Leave | 2.761 |
| SRR9715741 | Leave | 2.466 |
| SRR9715739 | Root | 5.885 |
| SRR9715742 | Root | 3.845 |
| SRR9715743 | Root | 5.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.276 |
| SRR8749028 | MeJA induced 9h | 44.114 |
| SRR8749029 | MeJA induced 9h | 14.715 |
| SRR8749030 | Uninduced | 25.182 |
| SRR8749031 | Uninduced | 5.603 |
| SRR8749032 | Uninduced | 6.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.478 |
| SRR8400027 | Control-Root | 9.484 |