Gene detail information of Glyur001007s00026102.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | NP_001238024.1 | 1.94E-31 | uncharacterized protein LOC100527825 [Glycine max] |
| trEMBL | tr|C6T5J1|C6T5J1_SOYBN | 7.00E-32 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA0048S00330.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01007 | 64599 | 65159 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.416 |
| SRR1783600 | control | 26.259 |
| SRR1783602 | moderate drought stress | 23.441 |
| SRR1811619 | moderate drought stress | 22.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.092 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.142 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.186 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.780 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.441 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.451 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.798 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.996 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.982 |
| SRR2967015 | Control (Tissue:root) | 2.900 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.566 |
| SRR9715740 | Leave | 7.352 |
| SRR9715741 | Leave | 7.031 |
| SRR9715739 | Root | 23.451 |
| SRR9715742 | Root | 11.815 |
| SRR9715743 | Root | 13.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.489 |
| SRR8749028 | MeJA induced 9h | 13.032 |
| SRR8749029 | MeJA induced 9h | 9.802 |
| SRR8749030 | Uninduced | 6.423 |
| SRR8749031 | Uninduced | 3.027 |
| SRR8749032 | Uninduced | 3.496 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 14.171 |
| SRR8400027 | Control-Root | 13.650 |