Gene detail information of Glyur001009s00021078.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G44850.10Protein kinase superfamily protein
NRXP_003540211.10PREDICTED: SRSF protein kinase 2-like [Glycine max]
COGYP_004584373.18.00E-10serine/threonine protein kinase with PASTA sensor(s) [Frankia symbiont of Datisca glomerata]
Swissprottr|P51567|AFC2_ARATH2.00E-25Serine/threonine-protein kinase AFC2
trEMBLtr|I1LTP7|I1LTP7_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G30440.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010092169025769-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.7


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001009s00021078.1PF00069.20Pkinase401801.60E-21
Glyur001009s00021078.1PF00069.20Pkinase3184814.10E-21


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.980
SRR1783600control6.986
SRR1783602moderate drought stress6.656
SRR1811619moderate drought stress6.649

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.988
DRR006520Root Summer glycyrrhizin high producing strain14.882
DRR006521Root Winter glycyrrhizin high producing strain7.878
DRR006522Root Winter glycyrrhizin high producing strain7.460
DRR006523Root Summer glycyrrhizin low producing strain18.473
DRR006524Root Summer glycyrrhizin low producing strain18.658
DRR006525Leaf Summer glycyrrhizin high producing strain10.306
DRR006526Leaf Summer glycyrrhizin high producing strain10.170

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.868
SRR2868004Drought Stress(Tissue:root)17.562
SRR2967015Control (Tissue:root)18.607

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.710
SRR9715740Leave16.588
SRR9715741Leave14.947
SRR9715739Root6.421
SRR9715742Root12.032
SRR9715743Root11.483

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.436
SRR8749028MeJA induced 9h13.390
SRR8749029MeJA induced 9h8.571
SRR8749030Uninduced7.044
SRR8749031Uninduced6.585
SRR8749032Uninduced4.824

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.093
SRR8400027Control-Root15.473

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved