Gene detail information of Glyur001011s00030361.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G48840.14.00E-107homolog of bacterial PANC
NRXP_004492324.13.53E-180PREDICTED: pantoate--beta-alanine ligase-like [Cicer arietinum]
COGYP_003496076.11.00E-78pantoate--beta-alanine ligase [Deferribacter desulfuricans SSM1]
Swissprottr|O24035|PANC_LOTJA0Pantoate--beta-alanine ligase (Precursor)
trEMBLtr|K7MSX3|K7MSX3_SOYBN7.00E-173Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G38038.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold01011813511859-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01918panC EC:6.3.2.1 beta-Alanine metabolism map00410
Pantothenate and CoA biosynthesismap00770


Gene Ontology

biological_process

GO:0015940  pantothenate biosynthetic process


molecular_function

GO:0004592  pantoate-beta-alanine ligase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001011s00030361.1PF02569.10Pantoate_ligase81141.60E-31
Glyur001011s00030361.1PF02569.10Pantoate_ligase1463211.60E-55


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.511
SRR1783600control1.509
SRR1783602moderate drought stress2.318
SRR1811619moderate drought stress2.254

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.680
DRR006520Root Summer glycyrrhizin high producing strain6.014
DRR006521Root Winter glycyrrhizin high producing strain8.094
DRR006522Root Winter glycyrrhizin high producing strain7.643
DRR006523Root Summer glycyrrhizin low producing strain11.350
DRR006524Root Summer glycyrrhizin low producing strain11.544
DRR006525Leaf Summer glycyrrhizin high producing strain0.577
DRR006526Leaf Summer glycyrrhizin high producing strain0.653

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.365
SRR2868004Drought Stress(Tissue:root)9.214
SRR2967015Control (Tissue:root)6.772

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.358
SRR9715740Leave1.051
SRR9715741Leave3.603
SRR9715739Root4.036
SRR9715742Root9.885
SRR9715743Root7.220

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h3.858
SRR8749028MeJA induced 9h5.227
SRR8749029MeJA induced 9h6.889
SRR8749030Uninduced11.150
SRR8749031Uninduced13.904
SRR8749032Uninduced8.802

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.393
SRR8400027Control-Root7.463

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved