Gene detail information of Glyur001018s00028941.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58430.14.00E-83exocyst subunit exo70 family protein B1
NRXP_003615884.17.31E-122Exocyst complex component [Medicago truncatula]
Swissprottr|Q9FGH9|E70B1_ARATH9.00E-97Exocyst complex component EXO70B1
trEMBLtr|G7JZR6|G7JZR6_MEDTR3.00E-122Exocyst subunit exo70 family protein {ECO:0000313|EMBL:AES98842.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010183710040038-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated

GO:0006887  exocytosis


cellular_component

GO:0000145  exocyst


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001018s00028941.1PF03081.10Exo702926251.20E-62
Glyur001018s00028941.1PF03106.10WRKY6396991.30E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.055
SRR1783600control0.073
SRR1783602moderate drought stress0.064
SRR1811619moderate drought stress0.058

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.093
DRR006520Root Summer glycyrrhizin high producing strain0.092
DRR006521Root Winter glycyrrhizin high producing strain0.103
DRR006522Root Winter glycyrrhizin high producing strain0.100
DRR006523Root Summer glycyrrhizin low producing strain0.102
DRR006524Root Summer glycyrrhizin low producing strain0.050
DRR006525Leaf Summer glycyrrhizin high producing strain4.050
DRR006526Leaf Summer glycyrrhizin high producing strain3.916

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.112
SRR2868004Drought Stress(Tissue:root)0.188
SRR2967015Control (Tissue:root)0.121

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.896
SRR9715740Leave1.799
SRR9715741Leave8.118
SRR9715739Root0.294
SRR9715742Root0.550
SRR9715743Root0.198

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.058
SRR8749028MeJA induced 9h0.092
SRR8749029MeJA induced 9h0.134
SRR8749030Uninduced0.029
SRR8749031Uninduced0.000
SRR8749032Uninduced0.026

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.197
SRR8400027Control-Root0.266

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved