Gene detail information of Glyur001018s00028948.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G02100.1 | 2.00E-82 | UDP-Glycosyltransferase superfamily protein |
| NR | KHN13565.1 | 0 | UDP-glycosyltransferase 83A1 [Glycine soja] |
| COG | YP_005373695.1 | 8.00E-12 | glycosyl transferase family protein [Corallococcus coralloides DSM 2259] |
| Swissprot | tr|Q9SGA8|U83A1_ARATH | 3.00E-97 | UDP-glycosyltransferase 83A1 |
| trEMBL | tr|I1N4J1|I1N4J1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G50060.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01018 | 90747 | 96104 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001018s00028948.1 | PF00201.13 | UDPGT | 239 | 394 | 1.70E-29 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.117 |
| SRR1783600 | control | 3.974 |
| SRR1783602 | moderate drought stress | 1.421 |
| SRR1811619 | moderate drought stress | 1.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.561 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.795 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.160 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.002 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 69.106 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 69.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.399 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.901 |
| SRR2967015 | Control (Tissue:root) | 4.817 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 23.697 |
| SRR9715740 | Leave | 24.316 |
| SRR9715741 | Leave | 22.466 |
| SRR9715739 | Root | 0.146 |
| SRR9715742 | Root | 5.048 |
| SRR9715743 | Root | 4.188 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.038 |
| SRR8749028 | MeJA induced 9h | 0.044 |
| SRR8749029 | MeJA induced 9h | 0.053 |
| SRR8749030 | Uninduced | 0.133 |
| SRR8749031 | Uninduced | 0.192 |
| SRR8749032 | Uninduced | 0.037 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.854 |
| SRR8400027 | Control-Root | 1.185 |