Gene detail information of Glyur001019s00033949.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G08850.2 | 4.00E-16 | Leucine-rich repeat receptor-like protein kinase family protein |
| NR | XP_004506333.1 | 1.22E-29 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Cicer arietinum] |
| Swissprot | tr|Q8VZG8|Y4885_ARATH | 1.00E-17 | Probable LRR receptor-like serine/threonine-protein kinase At4g08850 (Precursor) |
| trEMBL | tr|K7LSB8|K7LSB8_SOYBN | 4.00E-28 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G00980.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01019 | 59862 | 60604 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.12.4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001019s00033949.1 | PF00069.20 | Pkinase | 35 | 75 | 1.20E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.202 |
| SRR1783600 | control | 0.115 |
| SRR1783602 | moderate drought stress | 0.108 |
| SRR1811619 | moderate drought stress | 0.402 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.144 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.115 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.040 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.460 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.115 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.128 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.236 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.192 |
| SRR2967015 | Control (Tissue:root) | 0.230 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.126 |
| SRR9715741 | Leave | 0.363 |
| SRR9715739 | Root | 0.133 |
| SRR9715742 | Root | 0.617 |
| SRR9715743 | Root | 0.123 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.050 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.176 |
| SRR8749032 | Uninduced | 0.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.299 |
| SRR8400027 | Control-Root | 0.178 |