Gene detail

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Gene detail information of Glyur001019s00033956.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G08850.1	4.00E-84	Leucine-rich repeat receptor-like protein kinase family protein
NR	XP_003540583.1	0	PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850-like [Glycine max]
COG	YP_003640725.1	3.00E-24	serine/threonine protein kinase [Thermincola potens JR]
Swissprot	tr\|Q8VZG8\|Y4885_ARATH	1.00E-98	Probable LRR receptor-like serine/threonine-protein kinase At4g08850 (Precursor)
trEMBL	tr\|K7LSB8\|K7LSB8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G00980.2}

Sequence

Transcript Sequence

>Glyur001019s00033956.1
CCATATTCGTATCAGATACCCATTATTGTTGCTTGTTTGGGAGGTGCCCTTTTTCTTTCATTGGTGTTAGTTGGGGTTGTTTTCTTCTACAATAAGAGAAAGTCAAGAGTGTCAAGACAAAAGTCTCCATTAAAAAGACCAAATCCATTTTCAATTTGGTACTTTAATGGAAGAGTTGTTTATGGAGATATAATTGAAGCTACCAATAACTTTGACATCCAGTATTGCATTGGGGAAGGAGCATTGGGAATAGTCTACAAAGCAATGGTGCCAGGAGGTCAAGTATTTGCTGTGAAGAAATTAAAATGTGATGAAGACGACTTAGACACTGTGAGCATAAAAACCTTTCAGAGTGAGGTAGAAGCCATGTCAGAAACACGCCACCGAAACATTGTGAAGCTTTACGGATTTTGCTGTGAAGGGATGCACACATTCATGATTTATGAGTATATGGACAGAGGGAGCTTAGCTGATATGCTGTCAAATGACACGAAAGCATTAGAATTAGATTGGCATAAGAGGGTTGATATTGTCAAAGGTGTGGCAAACGCTCTATCCTATATGCATCATGATTGTGCTACACCTTTAATTCATAGAGACATATCAAGCAAGAATGTTTTGTTATCATCCAATCTTGAAGCTCATGTCTCAGATTTTGGCACTGCAAGATTTCTGAAATCCGATTCACTTATTTGGACATCATTTCAAGGCACATATGGCTATGCTGCTCCAGAGCTTGCTTACACACTGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGTGTTTTGGCATTCGAGGTTCTTACAGGAAAACACCCTGGTGATCTTGTTTCTTACATACAAACTTCTAGTGANCAAAAGATAGACTTCAAAGAGATTTTAGACAAGCGCCTCCCACCTCCTGCAAAAAAGGGTATCATGAAGGAATTGCAATTGATTATGGACTTAGCTATTTCTTGTTTACAAACAAACCCTCAAGCTCGACCAACCANNCGAAGCATAGCTCAGCTACTTGAAATGGAGACTACATATAACTCA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold01019	93509	94931	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.12.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001019s00033956.1	PF00069.20	Pkinase	73	337	1.90E-49

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.260
SRR1783600	control	1.400
SRR1783602	moderate drought stress	4.193
SRR1811619	moderate drought stress	4.896

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.513
DRR006520	Root Summer glycyrrhizin high producing strain	1.469
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.026
DRR006523	Root Summer glycyrrhizin low producing strain	4.526
DRR006524	Root Summer glycyrrhizin low producing strain	4.487
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.495
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.569

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.010
SRR2868004	Drought Stress(Tissue:root)	4.173
SRR2967015	Control (Tissue:root)	4.792

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	4.512
SRR9715740	Leave	1.911
SRR9715741	Leave	5.207
SRR9715739	Root	0.559
SRR9715742	Root	1.873
SRR9715743	Root	2.208

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.096
SRR8749029	MeJA induced 9h	0.029
SRR8749030	Uninduced	0.079
SRR8749031	Uninduced	0.525
SRR8749032	Uninduced	1.042

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.946
SRR8400027	Control-Root	0.852