Gene detail information of Glyur001020s00038698.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32180.1 | 4.00E-14 | pantothenate kinase 2 |
| NR | XP_006600640.1 | 7.02E-15 | PREDICTED: pantothenate kinase 2-like isoform X2 [Glycine max] |
| Swissprot | tr|Q8L5Y9|PANK2_ARATH | 1.00E-15 | Pantothenate kinase 2 |
| trEMBL | tr|K7MKQ2|K7MKQ2_SOYBN | 3.00E-15 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G09700.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01020 | 30545 | 34759 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K09680 | coaW | EC:2.7.1.33 | Pantothenate and CoA biosynthesis | map00770 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.655 |
| SRR1783600 | control | 0.905 |
| SRR1783602 | moderate drought stress | 3.339 |
| SRR1811619 | moderate drought stress | 4.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.271 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.916 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.716 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.400 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.516 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.601 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.819 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.833 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.986 |
| SRR2967015 | Control (Tissue:root) | 1.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.631 |
| SRR9715740 | Leave | 0.638 |
| SRR9715741 | Leave | 1.781 |
| SRR9715739 | Root | 0.811 |
| SRR9715742 | Root | 1.693 |
| SRR9715743 | Root | 2.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.432 |
| SRR8749028 | MeJA induced 9h | 0.489 |
| SRR8749029 | MeJA induced 9h | 0.127 |
| SRR8749030 | Uninduced | 0.053 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 4.405 |
| SRR8400027 | Control-Root | 4.059 |