Gene detail information of Glyur001024s00028098.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G07280.10Leucine-rich repeat transmembrane protein kinase
NRXP_004496591.10PREDICTED: leucine-rich repeat receptor protein kinase EXS-like [Cicer arietinum]
COGYP_004775215.16.00E-59RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|Q9LYN8|EXS_ARATH0Leucine-rich repeat receptor protein kinase EXS (Precursor)
trEMBLtr|A0A072VNY9|A0A072VNY9_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:KEH43739.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold010244864792+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur001024s00028098.1PF08263.7LRRNT_230661.40E-08
Glyur001024s00028098.1PF13516.1LRR_6921140.31
Glyur001024s00028098.1PF13855.1LRR_81422008.90E-09
Glyur001024s00028098.1PF00560.28LRR_12632810.24
Glyur001024s00028098.1PF13516.1LRR_64284501.7
Glyur001024s00028098.1PF00560.28LRR_14544750.93
Glyur001024s00028098.1PF13855.1LRR_85025602.10E-07
Glyur001024s00028098.1PF00560.28LRR_16126310.66
Glyur001024s00028098.1PF00560.28LRR_16576760.041
Glyur001024s00028098.1PF13855.1LRR_86817406.20E-10
Glyur001024s00028098.1PF00560.28LRR_17737941
Glyur001024s00028098.1PF00560.28LRR_17968180.27
Glyur001024s00028098.1PF00560.28LRR_18208410.39
Glyur001024s00028098.1PF07714.12Pkinase_Tyr96612293.80E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.384
SRR1783600control0.395
SRR1783602moderate drought stress0.223
SRR1811619moderate drought stress0.242

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.101
DRR006524Root Summer glycyrrhizin low producing strain0.118
DRR006525Leaf Summer glycyrrhizin high producing strain0.289
DRR006526Leaf Summer glycyrrhizin high producing strain0.287

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)1.805
SRR2868004Drought Stress(Tissue:root)0.961
SRR2967015Control (Tissue:root)0.709

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.135
SRR9715740Leave0.115
SRR9715741Leave0.052
SRR9715739Root0.647
SRR9715742Root0.725
SRR9715743Root0.816

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.479
SRR8749028MeJA induced 9h0.892
SRR8749029MeJA induced 9h0.498
SRR8749030Uninduced0.008
SRR8749031Uninduced0.031
SRR8749032Uninduced0.144

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.786
SRR8400027Control-Root0.619

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved